| Alkali Canyon |
| Animas River Canyon |
| Barker Arroyo-La Plata River |
| Cascade Creek |
| City of Farmington-Animas River |
| Coal Bed Canyon |
| Comb Wash-Lower San Juan River |
| Cottonwood Wash |
| Coyote Wash |
| Cross Canyon |
| Desert Creek-Lower San Juan River |
| Devil Canyon-Montezuma Creek |
| Disappointment Creek |
| Electra Lake-Animas River |
| Gothic Creek |
| Gypsum Valley-Dolores River |
| Headwaters Animas River |
| Headwaters Dolores River |
| Headwaters Florida River |
| Headwaters La Plata River |
| Hermosa Creek |
| La Sal Creek |
| Lake Electra-Animas River |
| Lightner Creek-Animas River |
| Lower Mancos River |
| Lower McElmo Creek |
| Marble Wash-San Juan River |
| McDermott Arroyo-La Plata River |
| McPhee Reservoir-Dolores River |
| Middle Animas Valley |
| Middle Mancos River |
| Middle McElmo Creek |
| Monument Canyon |
| Ojo Amarillo Canyon-San Juan River |
| Outlet Florida River |
| Plateau Creek |
| Ponderosa Gorge-Dolores River |
| Recapture Creek |
| Red Wash |
| Salt Creek |
| Salt Creek Wash-San Juan River |
| Salt Creek-San Juan River |
| Salt Creek-Upper San Juan River |
| Shiprock Wash |
| Shumway Arroyo |
| Summit Canyon-Dolores River |
| Tsitah Wash |
| Upper Mancos River |
| Upper McElmo Creek |
| Vega Creek-Montezuma Creek |
| West Dolores River |
| West Paradox Creek-Dolores River |
| Yellow Jacket Canyon |
| <all other values> |
